BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D03LP1|AL427471
(1045 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig984 2013 0.0
>3x_Contig984
Length = 4208
Score = 2013 bits (1012), Expect = 0.0
Identities = 1036/1046 (99%), Gaps = 1/1046 (0%)
Strand = Plus / Minus
Query: 1 atccagaccagtgcamc-atcggaacgataaaacagtgcatggaattagaggtgtgacaa 59
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3501 atccagaccagtgcaaccatcggaacgataaaacagtgcatggaattagaggtgtgacaa 3442
Query: 60 tgtatgcacacaataagtaaactagtcagacgtataccggatctatataccatgtgacat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3441 tgtatgcacacaataagtaaactagtcagacgtataccggatctatataccatgtgacat 3382
Query: 120 gctgcgactgcgaaatcacgaaatagtgtaactttttctttcccgttttttcgttgattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3381 gctgcgactgcgaaatcacgaaatagtgtaactttttctttcccgttttttcgttgattt 3322
Query: 180 aacggtgtcgagagagaagcaaaacgcgaagtttcgtctcgaacgaaaagaagttttaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3321 aacggtgtcgagagagaagcaaaacgcgaagtttcgtctcgaacgaaaagaagttttaac 3262
Query: 240 ggatacggtacttaatgcatgtatagagtttagatatgggtagattttcaatggggacca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3261 ggatacggtacttaatgcatgtatagagtttagatatgggtagattttcaatggggacca 3202
Query: 300 cgaaaaaaaagtgtcagttttatagttttggaaattacattacttgattgtgttttaatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3201 cgaaaaaaaagtgtcagttttatagttttggaaattacattacttgattgtgttttaatt 3142
Query: 360 agcatttttctttccttggtcgtcttgataactgatgcagcttgaagtacggttagatca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3141 agcatttttctttccttggtcgtcttgataactgatgcagcttgaagtacggttagatca 3082
Query: 420 gaaggacaacgggtgaattggattctgaagatcacgaaataaaattactattccaagatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3081 gaaggacaacgggtgaattggattctgaagatcacgaaataaaattactattccaagatc 3022
Query: 480 gcatagttttgggtatcaggtaccaccgcattgatgtatttactgtaagtagacaatggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 gcatagttttgggtatcaggtaccaccgcattgatgtatttactgtaagtagacaatggc 2962
Query: 540 agcgtgccttttttggcgcattgataaatgtgtaacctggagactcgcgaaggttcaaac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2961 agcgtgccttttttggcgcattgataaatgtgtaacctggagactcgcgaaggttcagac 2902
Query: 600 atatataamagagagattaggatcggaaggatgaagcatcttccagtactgcctgtcatg 659
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2901 atatataaaagagagattagggtcggaaggatgaagcatcttccagtactgcctgtcatg 2842
Query: 660 ttaggcacaattttgggagcatatcgtaagagcccaacaagcctataaagtctaagcatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841 ttaggcacaattttgggagcatatcgtaagagcccaacaagcctataaagtctaagcatg 2782
Query: 720 ttcaagaagaagagtttggaaattctgttcgattcaccagtgagcgatgatatgatcaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 ttcaagaagaagagtttggaaattctgttcgattcaccagtgagcgatgatatgatcaaa 2722
Query: 780 tttttaactgatcacgctttgagagtkattcctacacagaacagaaaccaaagataccca 839
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2721 tttttaactgatcacgctttgagagtgattcctacacagaacagaaaccaaagataccca 2662
Query: 840 ccttcaccaccgggcactccatccagtaagaaccacaatggagtwcccagtctaatgacg 899
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2661 ccttcaccaccgggcactccatccagtaagaaccacaatggagtacccagtctaatgacg 2602
Query: 900 ttcatttcgagattagtacggtacacgaacgtttacacatccacgttgttgaccaccgtg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2601 ttcatttcgagattagtacggtacacgaacgtttacacatccacgttgttgaccaccgtg 2542
Query: 960 gtatacctaaacagattgagggagttgttgccctccgatgcagccggkctgcctactaca 1019
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 2541 gtatacctaaacagattgagggagttgttgccctccgatgcagctggtctgcctactaca 2482
Query: 1020 tgccaaagaattttcctagcctgttt 1045
||||| ||||||||||||||||||||
Sbjct: 2481 tgccatagaattttcctagcctgttt 2456
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6778
Number of Sequences: 1807
Number of extensions: 6778
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 1045
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1029
effective length of database: 10,329,639
effective search space: 10629198531
effective search space used: 10629198531
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)